The detailed information of tRNA gene sequence


Sequence ID>WENV170130328
Genome IDCENQ01279190
Search identical group
Phylum/Class[CENQ] marine metagenome genome assembly TARA_031_SRF_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 273
End posion on genome 198
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
gcaccctttt
tRNA gene sequence 
GGGCGTGTAGATCAGCTGGAAGATCGCTACCTTGGCATGGTAGAGGCCACGAGTTCAAAT
CTCGTCACGTCCACCA
Downstream region at tRNA end position 
tattcactca
Secondary structure (Cloverleaf model)
>WENV170130328	Ala	GGC
                   t      ACCA tattcactca
                     G - C
                     G - C
                     G + T
                     C - G
                     G - C
                     T - A
                     G - C          T A
                    T     T G C T C     A
      C G A        A      | | | | |     A
    T       C T A G       A C G A G     C
    G       | | | |                 T T
    G       G A T C
      A A          G     AGGCC
                    C - G
                    T - A
                    A - T
                    C - G
                    C - G
                  T       T
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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