The detailed information of tRNA gene sequence


Sequence ID>WENV170131497
Genome IDCENS01072666
Search identical group
Phylum/Class[CENS] marine metagenome genome assembly TARA_022_SRF_0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 2144
End posion on genome 2233
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position
tctggaaaat
tRNA gene sequence
AGTTGGATGGCTGAGTGGTCTAAGGCAACAGTTTGCTAAACTGTCGTACTCGAAAGACTA
CCGAGGGTTCGAATCCCTCTCCAACTGCTA
Downstream region at tRNA end position
attcttttta
Secondary structure (Cloverleaf model)
>WENV170131497	Ser	GCT
                   t      GCTA attcttttta
                     A - T
                     G - C
                     T - A
                     T - A
                     G - C
                     G - C
                     A - T          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G T C G       G A G G G     C
    G         + | |                 T T
    T       A G G C
      C T A        A     CGTACTCGAAAGACTACC
                    A - T
                    C - G
                    A - T
                    G - C
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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