The detailed information of tRNA gene sequence


Sequence ID>WENV170136013
Genome IDCENU01409024
Search identical group
Phylum/Class[CENU] marine metagenome genome assembly TARA_025_SRF_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 278
End posion on genome 202
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position
caccaagtac
tRNA gene sequence
GGGCTCTTAGCTTAGTTGGTTAAAGCTATCCGCTCATAACGGATTGATCGTTGGTTCGAA
TCCAACAGGGCCCACCA
Downstream region at tRNA end position
ggagggtatg
Secondary structure (Cloverleaf model)
>WENV170136013	Met	CAT
                   c      ACCA ggagggtatg
                     G - C
                     G - C
                     G - C
                     C - G
                     T + G
                     C - G
                     T - A          T A
                    T     C A A C C     A
      T G A        A      | | | | |     G
    T       T T C G       G T T G G     C
    G       | | | |                 T T
    G       A A G C
      T T A        T     TGATC
                    A - T
                    T - A
                    C - G
                    C - G
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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