The detailed information of tRNA gene sequence


Sequence ID>WENV170138425
Genome IDCENW01117074
Search identical group
Phylum/Class[CENW] marine metagenome genome assembly TARA_032_SRF_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 299
End posion on genome 212
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position
gaaaattatT
tRNA gene sequence
GGATAAGTGATCGAGTGGTTTATGGTGCTAGTCTTGAAAACTAGTGTATTTAAAAGTACC
GTGGGTTCGAATCCTACCTTATCCGGCg
Downstream region at tRNA end position
aaatacgata
Secondary structure (Cloverleaf model)
>WENV170138425	Ser	TGA
                   T      GGCg aaatacgata
                     G - C
                     G - C
                     A - T
                     T - A
                     A - T
                     A - T
                     G - C          T A
                    T     C A T C C     A
      T G A        G      | | + | |     G
    G       G C T A       G T G G G     C
    G       + | + |                 T T
    T       T G G T
      T T A        G     TGTATTTAAAAGTACC
                    C - G
                    T - A
                    A - T
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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