The detailed information of tRNA gene sequence


Sequence ID>WENV170145549
Genome IDCENY01351056
Search identical group
Phylum/Class[CENY] marine metagenome genome assembly TARA_032_DCM_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 101
End posion on genome 28
Amino Acid Glu
Anticodon CTC
Upstream region at tRNA start position
ccagtctcag
tRNA gene sequence
GCCCCCTTCGTCTAGTGGCCCAGGACATTGGATTCTCAGTCCAAAGACAGGGGTTCGACT
CCCCTAGGGGGTACtt
Downstream region at tRNA end position
gggtcgggat
Secondary structure (Cloverleaf model)
>WENV170145549	Glu	CTC
                   g      ACtt gggtcgggat
                     G + T
                     C - G
                     C - G
                     C - G
                     C - G
                     C - G
                     T - A          T C
                    T     T C C C C     A
      T G A        C      | | | | |     G
    G       T C T G       A G G G G     C
    G       + | | |                 T T
    C       G G A C
      C C A        A     AGAC
                    T - A
                    T - A
                    G - C
                    G - C
                    A - T
                  T       G
                  T       A
                    C T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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