The detailed information of tRNA gene sequence


Sequence ID>WENV170151282
Genome IDCEOC01281348
Search identical group
Phylum/Class[CEOC] marine metagenome genome assembly TARA_036_DCM_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 289
End posion on genome 213
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
taatctaatT
tRNA gene sequence 
GGGGGCATAGCATAATCTGGTAGTGTAGCCGGCTCCAGACCGGCTGGTCGGGGTTCAAAT
CCCTGTGTCCCCATCA
Downstream region at tRNA end position 
atcttttata
Secondary structure (Cloverleaf model)
>WENV170151282	Trp	CCA
                   T      ATCA atcttttata
                     G - C
                     G - C
                     G - C
                     G - C
                     G + T
                     C - G
                     A - T          T A
                    T     G T C C C     A
      T A A        A      | + | | |     A
    C       T A C G       C G G G G     C
    T       + | | +                 T T
    G       G T G T
      G T A        A     TGGT
                    G - C
                    C - G
                    C - G
                    G - C
                    G - C
                  C       A
                  T       G
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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