The detailed information of tRNA gene sequence


Sequence ID>WENV170156212
Genome IDCEOH01085586
Search identical group
Phylum/Class[CEOH] marine metagenome genome assembly TARA_034_DCM_0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 198
End posion on genome 123
Amino Acid Val
Anticodon TAC
Upstream region at tRNA start position
atatttgaac
tRNA gene sequence
GGGCGGTTAGCTCAGTTGGCAGAGCATCTCGTTTACACCGAGAATGTCATAGGTTCGAGT
CCTGTACCGCCTACCA
Downstream region at tRNA end position
ttagccgggt
Secondary structure (Cloverleaf model)
>WENV170156212	Val	TAC
                   c      ACCA ttagccgggt
                     G + T
                     G - C
                     G - C
                     C - G
                     G - C
                     G - C
                     T - A          T G
                    T     T G T C C     A
      T G A        A      | + | | |     G
    T       C T C G       A T A G G     C
    G       | | | |                 T T
    G       G A G C
      C A          A     ATGTC
                    T - A
                    C - G
                    T - A
                    C - G
                    G - C
                  T       C
                  T       A
                    T A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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