The detailed information of tRNA gene sequence


Sequence ID>WENV170158259
Genome IDCEOJ01165801
Search identical group
Phylum/Class[CEOJ] marine metagenome genome assembly TARA_034_SRF_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 100
End posion on genome 176
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position
cctatgccaa
tRNA gene sequence
CTCGGTGTAGGTCAGTCTGGTAGACCGCTACGTTTGGGACGTAGATGTCGGAGGTTCAAA
TCCTTCCACCGAGACCA
Downstream region at tRNA end position
ttgggcgagc
Secondary structure (Cloverleaf model)
>WENV170158259	Pro	TGG
                   a      ACCA ttgggcgagc
                     C - G
                     T - A
                     C - G
                     G - C
                     G - C
                     T - A
                     G - C          T A
                    T     C T T C C     A
      T G A        A      | + | | |     A
    C       C T G G       G G A G G     C
    T       | | | |                 T T
    G       G A C C
      G T A        G     ATGTC
                    C - G
                    T - A
                    A - T
                    C - G
                    G - C
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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