The detailed information of tRNA gene sequence


Sequence ID>WENV170159293
Genome IDCEOK01054118
Search identical group
Phylum/Class[CEOK] marine metagenome genome assembly TARA_030_SRF_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 179
End posion on genome 93
Amino Acid Tyr
Anticodon GTA
Upstream region at tRNA start position 
ctacctattt
tRNA gene sequence 
GGAGGGATGGCGGAGTGGTCAATCGCAGCAGACTGTAAATCTGCCGAGCTTTGCTCTACG
TTGGTTCGAATCCAGCTCCCTCCACCA
Downstream region at tRNA end position 
ccattaaatt
Secondary structure (Cloverleaf model)
>WENV170159293	Tyr	GTA
                   t      ACCA ccattaaatt
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     C G A C C     A
      T G A        G      | + | | |     G
    G       G G C G       G T T G G     C
    G       + | | |                 T T
    T       T C G C
      C A A        A     CGAGCTTTGCTCTAC
                    G - C
                    C - G
                    A - T
                    G - C
                    A - T
                  C       A
                  T       A
                    G T A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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