The detailed information of tRNA gene sequence


Sequence ID>WENV170161931
Genome IDCEOL01042381
Search identical group
Phylum/Class[CEOL] marine metagenome genome assembly TARA_038_SRF_0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 180
End posion on genome 104
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position
catcaaggcc
tRNA gene sequence
GTGGTGGTGCCAGAGTTGGTTAATGGGGTGGATTGCAAATCCATTATTCGTGAGTTCAAA
TCTCACCCACCACTCAA
Downstream region at tRNA end position
acaaaaagga
Secondary structure (Cloverleaf model)
>WENV170161931	Cys	GCA
                   c      TCAA acaaaaagga
                     G - C
                     T - A
                     G - C
                     G - C
                     T - A
                     G - C
                     G - C          T A
                    T     C A C T C     A
      T G A        G      | | | | |     A
    T       G A C C       G T G A G     C
    G         | | |                 T T
    G       A T G G
      T T A        G     TATTC
                    G + T
                    T - A
                    G - C
                    G - C
                    A - T
                  T       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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