The detailed information of tRNA gene sequence


Sequence ID>WENV170163921
Genome IDCEOM01188192
Search identical group
Phylum/Class[CEOM] marine metagenome genome assembly TARA_004_SRF_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 293
End posion on genome 204
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position
cggagtacac
tRNA gene sequence
GGAGACGTGGCCGAGCCAGGTTGAAGGCGCTTCCCTGCTAAGGAAGTAACGTCGCAAGGC
GTTCGTGGGTTCAAATCCCACCGTCTCCGCtc
Downstream region at tRNA end position
agtcgacacg
Secondary structure (Cloverleaf model)
>WENV170163921	Ser	GCT
                   c      GCtc agtcgacacg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     C - G
                     G - C          T A
                    T     C A C C C     A
    C C G A        G      | | | | |     A
  A         G C C G       G T G G G     C
  G           | | |                 T T
  G         A G G C
    T T G A        G     TAACGTCGCAAGGCGTTC
                    C - G
                    T - A
                    T - A
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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