The detailed information of tRNA gene sequence


Sequence ID>WENV170163968
Genome IDCEOM01192591
Search identical group
Phylum/Class[CEOM] marine metagenome genome assembly TARA_004_SRF_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 396
End posion on genome 470
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position
atttaaattg
tRNA gene sequence
GGGCCTGTAGCTCAGTTGGTTAGAGCAACGGACTCATAATCCGTCGGTCGCAGGTTCGAG
TCCTGCCGGGCCCACtg
Downstream region at tRNA end position
tgtataaaaa
Secondary structure (Cloverleaf model)
>WENV170163968	Met	CAT
                   g      ACtg tgtataaaaa
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T + G
                     G - C          T G
                    T     C G T C C     A
      T G A        A      | | | | |     G
    T       C T C G       G C A G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     CGGTC
                    A - T
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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