The detailed information of tRNA gene sequence


Sequence ID>WENV170164030
Genome IDCEOM01195863
Search identical group
Phylum/Class[CEOM] marine metagenome genome assembly TARA_004_SRF_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 111
End posion on genome 185
Amino Acid Thr
Anticodon TGT
Upstream region at tRNA start position
taagtgattt
tRNA gene sequence
GCCGGCTTAGCTCAGTGGTAGAGCAACCGCCTTGTAAGCGGTAGGTCATCTGTTCAAATC
AGATAGTCGGCACCA
Downstream region at tRNA end position
gtaatcttat
Secondary structure (Cloverleaf model)
>WENV170164030	Thr	TGT
                   t      ACCA gtaatcttat
                     G - C
                     C - G
                     C - G
                     G - C
                     G + T
                     C - G
                     T - A          T A
                    T     T A G A C     A
        G A        A      | | | | |     A
      T     C T C G       A T C T G     C
      G     | | | |                 T T
      G     G A G C
        T A        A     AGGTC
                    A - T
                    C - G
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    T G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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