The detailed information of tRNA gene sequence


Sequence ID>WENV170164263
Genome IDCEOM01210601
Search identical group
Phylum/Class[CEOM] marine metagenome genome assembly TARA_004_SRF_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 106
End posion on genome 176
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
aatatcaaca
tRNA gene sequence 
AGGAGGATAGTTTAATGGCAAAGCGTTGGTCTCCAAAACCAGAACTATGGGTTCGAGTCC
CATTCTTCCTGaac
Downstream region at tRNA end position 
attttatttt
Secondary structure (Cloverleaf model)
>WENV170164263	Trp	CCA
                   a      Gaac attttatttt
                     A - T
                     G - C
                     G - C
                     A - T
                     G + T
                     G - C
                     A - T          T G
                    T     T A C C C     A
        A A        A      | | | | |     G
      T     T T T G       A T G G G     C
      G     | | + |                 T T
      G     A A G C
        C A        G     AACT
                    T + G
                    T - A
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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