The detailed information of tRNA gene sequence


Sequence ID>WENV170170198
Genome IDCEOP01400312
Search identical group
Phylum/Class[CEOP] marine metagenome genome assembly TARA_009_DCM_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 249
End posion on genome 325
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position
tcaggtgcac
tRNA gene sequence
GGGGATGTAGCTCAGCTGGTTAGAGCATCGGAATCATAATCCGAGTGTCAGGGGTTCAAG
TCCCTTCATCCCTACCA
Downstream region at tRNA end position
accaagcggg
Secondary structure (Cloverleaf model)
>WENV170170198	Met	CAT
                   c      ACCA accaagcggg
                     G + T
                     G - C
                     G - C
                     G - C
                     A - T
                     T - A
                     G - C          T G
                    T     T T C C C     A
      C G A        A      | + | | |     A
    T       C T C G       A G G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     GTGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    A - T
                  A       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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