The detailed information of tRNA gene sequence


Sequence ID>WENV170175260
Genome IDCEOQ01502130
Search identical group
Phylum/Class[CEOQ] marine metagenome genome assembly TARA_034_DCM_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 286
End posion on genome 192
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
gataagttta
tRNA gene sequence 
GGAAGCGAATGTGACCCTGGTGGGCACCACGGCCTTCAAAGCCGTTGTCTCGGATTAAAC
CGAGAGGTGGGTTCGATCCCCACACGTTTCCGCCA
Downstream region at tRNA end position 
tttaaaagcc
Secondary structure (Cloverleaf model)
>WENV170175260	SeC	TCA
                   a      GCCA tttaaaagcc
                     G - C
                     G - C
                     A - T
                     A - T
                     G + T
                     C - G
                     G - C
                     A   A          C T
                    A     C A C C C     A
      C C C        T      | | | | |     G
    T       A G T G       G T G G G     C
    G         | | |                 T T
    G       G C A C
      T G G        C     TGTCTCGGATTAAACCGAGAG
                    A - T
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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