The detailed information of tRNA gene sequence


Sequence ID>WENV170175391
Genome IDCEOR01010852
Search identical group
Phylum/Class[CEOR] marine metagenome genome assembly TARA_064_DCM_0.1-0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 2226
End posion on genome 2151
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
cgggtgccac
tRNA gene sequence 
GTAACCGTGGCTGAATTGGTTAGGCATCGGATTGCAAATCCGATTTATGCAGGTTCGAAT
CCTGTCGGTTACTCCA
Downstream region at tRNA end position 
taaatatttt
Secondary structure (Cloverleaf model)
>WENV170175391	Cys	GCA
                   c      TCCA taaatatttt
                     G - C
                     T - A
                     A - T
                     A - T
                     C - G
                     C - G
                     G - C          T A
                    T     T G T C C     A
      T A A        G      + | | | |     G
    T       G T C G       G C A G G     C
    G         + | |                 T T
    G       A G G C
      T T          A     TTTAT
                    T - A
                    C - G
                    G - C
                    G - C
                    A - T
                  T       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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