The detailed information of tRNA gene sequence


Sequence ID>WENV170175457
Genome IDCEOR01031746
Search identical group
Phylum/Class[CEOR] marine metagenome genome assembly TARA_064_DCM_0.1-0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 120
End posion on genome 47
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position
aagtaattga
tRNA gene sequence
GAGGTAGTGTCCGAGTGGTTAGGAAGTGGTCTGCAAAACTATTTACGGGGGTTCAAATCC
CTCCTACCTCTCCA
Downstream region at tRNA end position
aaaataacgg
Secondary structure (Cloverleaf model)
>WENV170175457	Cys	GCA
                   a      TCCA aaaataacgg
                     G - C
                     A - T
                     G - C
                     G - C
                     T - A
                     A - T
                     G - C          T A
                    T     C T C C C     A
        G A        G      | + | | |     A
      T     G C C T       G G G G G     C
      G       | | |                 T T
      G     A G G A
        T T        A     TTAC
                    G + T
                    T - A
                    G + T
                    G - C
                    T - A
                  C       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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