The detailed information of tRNA gene sequence


Sequence ID>WENV170178000
Genome IDCEOU01186078
Search identical group
Phylum/Class[CEOU] marine metagenome genome assembly TARA_065_DCM_0.1-0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 1157
End posion on genome 1066
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
aaagagaatg
tRNA gene sequence 
GGAGAGGTGGCTGAGTGGTTTAAGGCGGCGGTTTGCTAAACCGTTGAAGGAATAATTTCC
TTCCGCTGGTTCGAATCCAGTCCTCTCCGCCA
Downstream region at tRNA end position 
tttaattaat
Secondary structure (Cloverleaf model)
>WENV170178000	Ser	GCT
                   g      GCCA tttaattaat
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     T G A C C     A
      T G A        G      + | | | |     G
    G       G T C G       G C T G G     C
    G         + | |                 T T
    T       A G G C
      T T A        G     TGAAGGAATAATTTCCTTCC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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