The detailed information of tRNA gene sequence


Sequence ID>WENV170178834
Genome IDCEOV01087248
Search identical group
Phylum/Class[CEOV] marine metagenome genome assembly TARA_062_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 340
End posion on genome 415
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position
cgcgcgggtT
tRNA gene sequence
GCTTGGGTGGTCTAGTTGGTCATGACGTCTGCTTCACACGCAGAAGGTCGCGAGTTCGAG
TCTCGCCTCGAGTATtt
Downstream region at tRNA end position
tttttgccaa
Secondary structure (Cloverleaf model)
>WENV170178834	Val	CAC
                   T      ATtt tttttgccaa
                     G + T
                     C - G
                     T - A
                     T + G
                     G - C
                     G + T
                     G - C          T G
                    T     C G C T C     A
      T G A        G      | | | | |     G
    T       T C T G       G C G A G     C
    G         | | |                 T T
    G       T G A C
      T C A        G     AGGTC
                    T - A
                    C - G
                    T - A
                    G - C
                    C - G
                  T       C
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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