The detailed information of tRNA gene sequence


Sequence ID>WENV170180051
Genome IDCEOW01045257
Search identical group
Phylum/Class[CEOW] marine metagenome genome assembly TARA_058_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 423
End posion on genome 329
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
tcttaatagt
tRNA gene sequence 
GGAGGTGAATGAGCGCCTGGTGGGCTCCACAGTCTTCAAAACTGTTGAAAGGTGTAAAAG
TCTTTGGCAGGTTCGATTCCTGTCCACCTCCGCTA
Downstream region at tRNA end position 
ctttataaga
Secondary structure (Cloverleaf model)
>WENV170180051	SeC	TCA
                   t      GCTA ctttataaga
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     T - A
                     G - C
                     A   C          T T
                    A     T G T C C     A
      C C G        T      + | | | |     G
    T       C G A G       G C A G G     C
    G       | | | |                 T T
    G       G C T C
      T G G        C     TGAAAGGTGTAAAAGTCTTTG
                    A - T
                    C - G
                    A - T
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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