The detailed information of tRNA gene sequence


Sequence ID>WENV170180328
Genome IDCEOW01080495
Search identical group
Phylum/Class[CEOW] marine metagenome genome assembly TARA_058_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 361
End posion on genome 267
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position
tctaaattta
tRNA gene sequence
GGTGAGATGGGTGAGCTGGTTTAAACCATCGGTTTGCTAAACCGACGTACGATTGAAAAG
TCGTACCGAGAGTTCGAATCTCTCTCTCACCGCCA
Downstream region at tRNA end position
aattaatggt
Secondary structure (Cloverleaf model)
>WENV170180328	Ser	GCT
                   a      GCCA aattaatggt
                     G - C
                     G - C
                     T - A
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C T C T C     A
    T C G A        G      | | | | |     G
  G         G T G G       G A G A G     C
  G           | | |                 T T
  T         A A C C
    T T A          A     CGTACGATTGAAAAGTCGTACC
                    T - A
                    C - G
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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