The detailed information of tRNA gene sequence


Sequence ID>WENV170181042
Genome IDCEOW01172809
Search identical group
Phylum/Class[CEOW] marine metagenome genome assembly TARA_058_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 179
End posion on genome 270
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
cagtagatgt
tRNA gene sequence 
GGAAAGATGACTGAGTGGCTTAAGGTGCTGGACTGCTAATCCGGTGTACTGCGTAAGCGG
TACCGAGGGTTCGAATCCCTCTCTTTCCGCCA
Downstream region at tRNA end position 
tatttgctaa
Secondary structure (Cloverleaf model)
>WENV170181042	Ser	GCT
                   t      GCCA tatttgctaa
                     G - C
                     G - C
                     A - T
                     A - T
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G T C A       G A G G G     C
    G         + | |                 T T
    C       A G G T
      T T A        G     TGTACTGCGTAAGCGGTACC
                    C - G
                    T + G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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