The detailed information of tRNA gene sequence


Sequence ID>WENV170183428
Genome IDCEOY01111637
Search identical group
Phylum/Class[CEOY] marine metagenome genome assembly TARA_056_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 444
End posion on genome 516
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position
cacatggtta
tRNA gene sequence
CAGGGGGTAGCTCAATTGGTAGAGTGGTCGCTTTGGGAGCGGCTGGTTGTAGGTTCGAAT
CCTGCTCTCCTGAttt
Downstream region at tRNA end position
ttaaatatat
Secondary structure (Cloverleaf model)
>WENV170183428	Pro	TGG
                   a      Attt ttaaatatat
                     C - G
                     A - T
                     G - C
                     G - C
                     G + T
                     G - C
                     G + T          T A
                    T     C G T C C     A
      T A A        A      | + | | |     G
    T       C T C G       G T A G G     C
    G       | | | +                 T T
    G       G A G T
      T A          G     TGGTT
                    G - C
                    T + G
                    C - G
                    G - C
                    C - G
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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