The detailed information of tRNA gene sequence


Sequence ID>WENV170191984
Genome IDCEPD01106766
Search identical group
Phylum/Class[CEPD] marine metagenome genome assembly TARA_064_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 310
End posion on genome 382
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position
acgttttttt
tRNA gene sequence
GGCCGGTTCGTCTAGTGGTTAGGACTCATGGTTTTCATCCATGCAACAGGGGTTCGATTC
CCCTACCGGCTGCac
Downstream region at tRNA end position
accctttcct
Secondary structure (Cloverleaf model)
>WENV170191984	Glu	TTC
                   t      GCac accctttcct
                     G + T
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     T - A          T T
                    T     T C C C C     A
      T G A        C      | | | | |     G
    G       T C T G       A G G G G     C
    G       + | | |                 T T
    T       G G A C
      T A          T     CAAC
                    C - G
                    A - T
                    T - A
                    G - C
                    G - C
                  T       T
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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