The detailed information of tRNA gene sequence


Sequence ID>WENV170192297
Genome IDCEPE01076319
Search identical group
Phylum/Class[CEPE] marine metagenome genome assembly TARA_042_DCM_0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 296
End posion on genome 219
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
aataaactat
tRNA gene sequence 
GGGGCTATAGCTCAATTTGGTTAGAGCAGGGCGCTCATAACGCCAAGGTTCTAGGTTCAA
GTCCTAGTAGCCCTACCA
Downstream region at tRNA end position 
tttataatcg
Secondary structure (Cloverleaf model)
>WENV170192297	Met	CAT
                   t      ACCA tttataatcg
                     G + T
                     G - C
                     G - C
                     G - C
                     C - G
                     T - A
                     A - T          T G
                    T     G A T C C     A
    T T A A        A      | | | | |     A
  T         C T C G       C T A G G     C
  G         | | | |                 T T
  G         G A G C
    T T A          A     AGGTT
                    G   A
                    G - C
                    G - C
                    C - G
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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