The detailed information of tRNA gene sequence


Sequence ID>WENV170192329
Genome IDCEPE01089211
Search identical group
Phylum/Class[CEPE] marine metagenome genome assembly TARA_042_DCM_0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 154
End posion on genome 78
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
gtaaccatac
tRNA gene sequence 
CGGCTCCTAGCTCAATCGGTTAGAGCAGCGGTCTCATAAACCGCAGGTTCTGGGTTCGAT
CCCCAGGGAGCCGACCA
Downstream region at tRNA end position 
accatagggg
Secondary structure (Cloverleaf model)
>WENV170192329	Met	CAT
                   c      ACCA accatagggg
                     C - G
                     G - C
                     G - C
                     C - G
                     T - A
                     C - G
                     C - G          C T
                    T     G A C C C     A
      T A A        A      | | | | |     G
    C       C T C G       C T G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     AGGTT
                    G - C
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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