The detailed information of tRNA gene sequence


Sequence ID>WENV170192361
Genome IDCEPE01103956
Search identical group
Phylum/Class[CEPE] marine metagenome genome assembly TARA_042_DCM_0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 701
End posion on genome 625
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
aaaaaaatac
tRNA gene sequence 
GCTCCCGTAGCTCAGTTGGTTAGAGCTACCCGCTCATAACGGGGAGGTCGTAGGTTCAAG
TCCTACCGGGAGCACAA
Downstream region at tRNA end position 
gattggagga
Secondary structure (Cloverleaf model)
>WENV170192361	Met	CAT
                   c      ACAA gattggagga
                     G - C
                     C - G
                     T - A
                     C - G
                     C - G
                     C - G
                     G - C          T G
                    T     C A T C C     A
      T G A        A      | | | | |     A
    T       C T C G       G T A G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        T     AGGTC
                    A   G
                    C - G
                    C - G
                    C - G
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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