The detailed information of tRNA gene sequence


Sequence ID>WENV170192730
Genome IDCEPG01001015
Search identical group
Phylum/Class[CEPG] marine metagenome genome assembly TARA_046_SRF_0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 109
End posion on genome 195
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position
aatcaaatag
tRNA gene sequence
GGAAGAGTGGTCGAGTGGTTTATGGCACTGGTCTTGAAAACCAGCGAGGGTGCAAGTCCT
CCGTGGGTTCAAATCCCACCTCTTCCGtta
Downstream region at tRNA end position
taatttccta
Secondary structure (Cloverleaf model)
>WENV170192730	Ser	TGA
                   g      Gtta taatttccta
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     A - T
                     G - C          T A
                    T     C A C C C     A
      T G A        G      | | | | |     A
    G       G C T G       G T G G G     C
    G       + | + |                 T T
    T       T G G C
      T T A        A     CGAGGGTGCAAGTCCTCC
                    C - G
                    T - A
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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