The detailed information of tRNA gene sequence


Sequence ID>WENV170193354
Genome IDCEPH01065991
Search identical group
Phylum/Class[CEPH] marine metagenome genome assembly TARA_048_SRF_0.1-0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 550
End posion on genome 477
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
gaggcttttt
tRNA gene sequence 
CTGCAGGTGGCCGAATGGTTTAAGGCGCTTGATTGCAATCCAGGTTTTTGCGGGTTCGAA
TCCCGCCCTGCAGTtat
Downstream region at tRNA end position 
gaattcacct
Secondary structure (Cloverleaf model)
>WENV170193354	Cys	GCA
                   t      Ttat gaattcacct
                     C - G
                     T - A
                     G - C
                     C - G
                     A - T
                     G - C
                     G - C          T A
                    T     C G C C C     A
      T A A        G      | | | | |     G
    G       G C C G       G C G G G     C
    G         | | |                 T T
    T       A G G C
      T T A        G     TTTTT
                    C - G
                    T + G
                    T - A
                    G - C
                    A   C
                  T       T
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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