The detailed information of tRNA gene sequence


Sequence ID>WENV170195654
Genome IDCEPJ01193362
Search identical group
Phylum/Class[CEPJ] marine metagenome genome assembly TARA_048_SRF_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 477
End posion on genome 401
Amino Acid His
Anticodon GTG
Upstream region at tRNA start position 
aagaacttat
tRNA gene sequence 
GCGCTGCTAGTGTAACGGTTTTCGCACGGAATCCTGTGGAGATTCAAGACAAAGTTCGAC
TCTTTGGCAGCGTACCA
Downstream region at tRNA end position 
acggccttta
Secondary structure (Cloverleaf model)
>WENV170195654	His	GTG
                   t      ACCA acggccttta
                     G + T
                     C - G
                     G - C
                     C - G
                     T - A
                     G - C
                     C - G          T C
                    T     G T T T C     A
    G C A A        A      | | | | |     G
  G         T G T G       C A A A G     C
  T         + | | |                 T T
  T         G C A C
    T T C          G     AAGA
                    G - C
                    A - T
                    A - T
                    T - A
                    C - G
                  C       A
                  T       G
                    G T G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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