The detailed information of tRNA gene sequence


Sequence ID>WENV170195735
Genome IDCEPJ01251276
Search identical group
Phylum/Class[CEPJ] marine metagenome genome assembly TARA_048_SRF_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 563
End posion on genome 638
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
cacttgttaa
tRNA gene sequence 
GCGCCTTTAGTTCAGCTGGTAGAACGTAAGTCTCCAAAATTTAATGTCAAAGGTTCGAGT
CCTTTAGGGCGCGCTA
Downstream region at tRNA end position 
ataataaaat
Secondary structure (Cloverleaf model)
>WENV170195735	Trp	CCA
                   a      GCTA ataataaaat
                     G - C
                     C - G
                     G - C
                     C - G
                     C - G
                     T + G
                     T - A          T G
                    T     T T T C C     A
      C G A        A      | | | | |     G
    T       C T T G       A A A G G     C
    G       | | | |                 T T
    G       G A A C
      T A          G     ATGTC
                    T - A
                    A - T
                    A - T
                    G + T
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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