The detailed information of tRNA gene sequence


Sequence ID>WENV170195811
Genome IDCEPJ01279474
Search identical group
Phylum/Class[CEPJ] marine metagenome genome assembly TARA_048_SRF_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 1154
End posion on genome 1079
Amino Acid Val
Anticodon TAC
Upstream region at tRNA start position 
gctaatggtT
tRNA gene sequence 
GGGTGACTAGTTCAATGGTAGAGCATCTCCCTTACAAGGAGAAAGTTAGTGGTTCGAATC
CACTGTTGCCCAGCC
Downstream region at tRNA end position 
tttaacgtgt
Secondary structure (Cloverleaf model)
>WENV170195811	Val	TAC
                   T      AGCC tttaacgtgt
                     G - C
                     G - C
                     G - C
                     T + G
                     G + T
                     A - T
                     C - G          T A
                    T     T C A C C     A
        A A        A      | | | | |     G
      T     C T T G       A G T G G     C
      G     | | + |                 T T
      G     G A G C
        T A        A     AAGTT
                    T - A
                    C - G
                    T - A
                    C - G
                    C - G
                  C       A
                  T       A
                    T A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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