The detailed information of tRNA gene sequence


Sequence ID>WENV170197181
Genome IDCEPK01109205
Search identical group
Phylum/Class[CEPK] marine metagenome genome assembly TARA_042_DCM_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 518
End posion on genome 595
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position 
aaacgcatca
tRNA gene sequence 
GGGCCCGTAGGTTAGCTTGGCCTATACTTGGCGCTTCGGGGGCGTTAGACCCCAGTTCAA
ATCTGGGCGGGCCCACCA
Downstream region at tRNA end position 
atctcttctt
Secondary structure (Cloverleaf model)
>WENV170197181	Pro	CGG
                   a      ACCA atctcttctt
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     G G G T C     A
    T C G A        A      | | | | |     A
  T         T T G G       C C C A G     C
  G           | | +                 T T
  G         T A C T
    C C T A        T     AGAC
                    G + T
                    G + T
                    C - G
                    G - C
                    C - G
                  T       G
                  T       G
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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