The detailed information of tRNA gene sequence


Sequence ID>WENV170200059
Genome IDCEPM01016987
Search identical group
Phylum/Class[CEPM] marine metagenome genome assembly TARA_038_SRF_0.1-0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 1204
End posion on genome 1132
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
aacataatga
tRNA gene sequence 
GGGAGTGTAGCTCAATGGTCAGAGCAAGCGACTCATAATCGTTAGGTTACAGGTTCGAAT
CCTGTCGCTCCCAgat
Downstream region at tRNA end position 
cgcccagttc
Secondary structure (Cloverleaf model)
>WENV170200059	Met	CAT
                   a      Agat cgcccagttc
                     G - C
                     G - C
                     G - C
                     A - T
                     G - C
                     T + G
                     G - C          T A
                    T     T G T C C     A
      T A A        A      | | | | |     G
    G       C T C G       A C A G G     C
    G       | | | |                 T T
    T       G A G C
      C A          A     AGGTT
                    A - T
                    G + T
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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