The detailed information of tRNA gene sequence


Sequence ID>WENV170200108
Genome IDCEPM01022236
Search identical group
Phylum/Class[CEPM] marine metagenome genome assembly TARA_038_SRF_0.1-0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 78
End posion on genome 3
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
accgccaact
tRNA gene sequence 
GGACCTGTGGTGTAGTGGTTAACACGTCCGCCTGTCACGCGGAAGATCGAGGGTTCGAGT
CCCTTCAGGTCCGCCA
Downstream region at tRNA end position 
ttnnnnnnnn
Secondary structure (Cloverleaf model)
>WENV170200108	Asp	GTC
                   t      GCCA ttnnnnnnnn
                     G - C
                     G - C
                     A - T
                     C - G
                     C - G
                     T - A
                     G - C          T G
                    T     T T C C C     A
      T G A        G      + | | | |     G
    G       T G T G       G A G G G     C
    G       | | | |                 T T
    T       A C A C
      T A          G     AGATC
                    T - A
                    C - G
                    C - G
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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