The detailed information of tRNA gene sequence


Sequence ID>WENV170200127
Genome IDCEPM01025388
Search identical group
Phylum/Class[CEPM] marine metagenome genome assembly TARA_038_SRF_0.1-0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 478
End posion on genome 554
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position
gctcattttt
tRNA gene sequence
CGGGGAGTAGCGCAGCCTGGCAGCGCATCTGGTTTGGGACCAGAGGGTCGCAGGTTCAAA
TCCTGCCTTCCCGACCA
Downstream region at tRNA end position
aagtaacact
Secondary structure (Cloverleaf model)
>WENV170200127	Pro	TGG
                   t      ACCA aagtaacact
                     C - G
                     G - C
                     G - C
                     G - C
                     G + T
                     A - T
                     G - C          T A
                    T     C G T C C     A
      C G A        A      | | | | |     A
    C       C G C G       G C A G G     C
    T       | | | |                 T T
    G       G C G C
      G C A        A     GGGTC
                    T - A
                    C - G
                    T - A
                    G - C
                    G - C
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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