The detailed information of tRNA gene sequence


Sequence ID>WENV170200134
Genome IDCEPM01025995
Search identical group
Phylum/Class[CEPM] marine metagenome genome assembly TARA_038_SRF_0.1-0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 272
End posion on genome 197
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
aataattatT
tRNA gene sequence 
CGGGACGTAGCTCAGTTTGGTAGAGCACCCGCTTTGGGAGCGGGCGGCCGTAGGTTCAAA
TCCTATCGTCCCGATtc
Downstream region at tRNA end position 
atcatacctc
Secondary structure (Cloverleaf model)
>WENV170200134	Pro	TGG
                   T      ATtc atcatacctc
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T
                     C - G
                     G - C          T A
                    T     T A T C C     A
      T G A        A      + | | | |     A
    T       C T C G       G T A G G     C
    T       | | | |                 T T
    G       G A G C
      G T A        A     CGGCC
                    C - G
                    C - G
                    C - G
                    G - C
                    C - G
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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