The detailed information of tRNA gene sequence


Sequence ID>WENV170200362
Genome IDCEPN01005103
Search identical group
Phylum/Class[CEPN] marine metagenome genome assembly TARA_038_DCM_0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 63270
End posion on genome 63194
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
cgggccgctg
tRNA gene sequence 
GGGCCTGTAGCTCAGTTGGTTAGAGCGGACCGCTCATAACGGTTTGGTCGCGGGTTCAAA
TCCTGCCGGGCCCACCA
Downstream region at tRNA end position 
ttttcctgtg
Secondary structure (Cloverleaf model)
>WENV170200362	Met	CAT
                   g      ACCA ttttcctgtg
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T + G
                     G - C          T A
                    T     C G T C C     A
      T G A        A      | | + | |     A
    T       C T C G       G C G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     TGGTC
                    G + T
                    A - T
                    C - G
                    C - G
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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