The detailed information of tRNA gene sequence


Sequence ID>WENV170201121
Genome IDCEPP01078358
Search identical group
Phylum/Class[CEPP] marine metagenome genome assembly TARA_042_SRF_0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 793
End posion on genome 867
Amino Acid Arg
Anticodon CCT
Upstream region at tRNA start position
tgggcgcgac
tRNA gene sequence
GCCCCTGTAGTTAAATGGATATAACGTTCCCCTCCTAAGGGAATATTACAGGTTCGATTC
CTGTCGGGGGCGCCA
Downstream region at tRNA end position
gcctgtcaga
Secondary structure (Cloverleaf model)
>WENV170201121	Arg	CCT
                   c      GCCA gcctgtcaga
                     G - C
                     C - G
                     C - G
                     C - G
                     C - G
                     T + G
                     G - C          T T
                    T     T G T C C     A
      T A A        A      | | | | |     G
    G       A T T G       A C A G G     C
    G       | | | |                 T T
    A       T A A C
      T A          G     TATT
                    T - A
                    T - A
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    C C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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