The detailed information of tRNA gene sequence


Sequence ID>WENV170201658
Genome IDCEPQ01042199
Search identical group
Phylum/Class[CEPQ] marine metagenome genome assembly TARA_038_MES_0.1-0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 338
End posion on genome 264
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position
ttctgaatta
tRNA gene sequence
GATGGAGTGGTGTAACCGGCAGCATGGCGGGCTCCAACCCCGCAGGTCAGGGTTCAAATC
CTTGCTCCATTGCCA
Downstream region at tRNA end position
atctgatttg
Secondary structure (Cloverleaf model)
>WENV170201658	Trp	CCA
                   a      GCCA atctgatttg
                     G + T
                     A - T
                     T - A
                     G - C
                     G - C
                     A - T
                     G - C          T A
                    T     G T T C C     A
      C A A        G      | | + | |     A
    C       T G T G       C A G G G     C
    G       + | | +                 T T
    G       G C A T
      C A          G     AGGT
                    G - C
                    C - G
                    G - C
                    G - C
                    G - C
                  C       C
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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