The detailed information of tRNA gene sequence


Sequence ID>WENV170201926
Genome IDCEPQ01069831
Search identical group
Phylum/Class[CEPQ] marine metagenome genome assembly TARA_038_MES_0.1-0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 491
End posion on genome 415
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position
ctgaaattgc
tRNA gene sequence
GGGGGCGTAGTTGAGCTGGTTACAACATCGCCCTGTCACGGCGAAGGTCGCGAGTTCGAA
TCTCGTCGCTCCCGCCA
Downstream region at tRNA end position
ttaatgagtt
Secondary structure (Cloverleaf model)
>WENV170201926	Asp	GTC
                   c      GCCA ttaatgagtt
                     G - C
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     G - C          T A
                    T     T G C T C     A
      C G A        A      + | | | |     G
    T       G T T G       G C G A G     C
    G       | | | |                 T T
    G       C A A C
      T T A        A     AGGTC
                    T - A
                    C - G
                    G - C
                    C - G
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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