The detailed information of tRNA gene sequence


Sequence ID>WENV170202239
Genome IDCEPQ01130622
Search identical group
Phylum/Class[CEPQ] marine metagenome genome assembly TARA_038_MES_0.1-0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 25653
End posion on genome 25727
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
aaattttatc
tRNA gene sequence 
CGGGGCGTGGCGTAGTTTGGCTAGCGCGTCTGTTTTGGGAACAGAAGGTCATATGTTCGA
ATCATATCGTCCCGAttt
Downstream region at tRNA end position 
ccatagtata
Secondary structure (Cloverleaf model)
>WENV170202239	Pro	TGG
                   c      Attt ccatagtata
                     C - G
                     G - C
                     G - C
                     G - C
                     G + T
                     C - G
                     G - C          T A
                    T     T A T A C     A
    T T G A        G      | | | | |     G
  T         T G C G       A T A T G     C
  G         + | | |                 T T
  G         G C G C
    C T A          G     AGGTC
                    T - A
                    C - G
                    T - A
                    G - C
                    T - A
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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