The detailed information of tRNA gene sequence


Sequence ID>WENV170202549
Genome IDCEPR01056052
Search identical group
Phylum/Class[CEPR] marine metagenome genome assembly TARA_039_SRF_0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 1041
End posion on genome 965
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position
ccggctactt
tRNA gene sequence
GCACTCTTAGCTCAGTTGGTCAGAGCAACCGGCTCATAACCGGTAGGTCACAGGTTCAAG
CCCTGTAGGGTGCACCT
Downstream region at tRNA end position
tgcaaaagaa
Secondary structure (Cloverleaf model)
>WENV170202549	Met	CAT
                   t      ACCT tgcaaaagaa
                     G - C
                     C - G
                     A - T
                     C - G
                     T + G
                     C - G
                     T - A          C G
                    T     T G T C C     A
      T G A        A      | | | | |     A
    T       C T C G       A C A G G     C
    G       | | | |                 T T
    G       G A G C
      T C A        A     AGGTC
                    A - T
                    C - G
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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