The detailed information of tRNA gene sequence


Sequence ID>WENV170202727
Genome IDCEPS01002465
Search identical group
Phylum/Class[CEPS] marine metagenome genome assembly TARA_038_MES_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 420
End posion on genome 323
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position
gggttgaatt
tRNA gene sequence
GGGAGTGGGAGGGTTCCGGTGAACTTCGCGGACTTCAAATCCGTTGGCATGCGTCCTTCG
ATGTGTGCGGAGGGTTCGACTCCCTTGCACTCCCGCCA
Downstream region at tRNA end position
atggttgtag
Secondary structure (Cloverleaf model)
>WENV170202727	SeC(p)	TCA
                   t      GCCA atggttgtag
                     G - C
                     G - C
                     G - C
                     A - T
                     G - C
                     T - A
                     G - C
                     G   G          T C
                    G     T T C C C     A
      C C T        A      + | | | |     G
    G       T G G G       G A G G G     C
    G       | | + +                 T T
    T       A C T T
      G A          C     TGGCATGCGTCCTTCGATGTGTGCG
                    G + T
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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