The detailed information of tRNA gene sequence


Sequence ID>WENV170204116
Genome IDCEPS01141713
Search identical group
Phylum/Class[CEPS] marine metagenome genome assembly TARA_038_MES_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 650
End posion on genome 577
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
nnnnnnnnnn
tRNA gene sequence 
GGGGGTGTAGTACAGTGGTAGTATGCGGGTCTCCAAAACCTGAGACGGGGGTTCAATTCC
CTCCACCCCTGCCA
Downstream region at tRNA end position 
cgcttagcgt
Secondary structure (Cloverleaf model)
>WENV170204116	Trp	CCA
                   n      GCCA cgcttagcgt
                     G + T
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C          T T
                    T     C T C C C     A
        G A        A      | + | | |     A
      T     C A T G       G G G G G     C
      G     | | | +                 T T
      G     G T A T
        T A        G     AGAC
                    C - G
                    G + T
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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