The detailed information of tRNA gene sequence


Sequence ID>WENV170204194
Genome IDCEPS01162201
Search identical group
Phylum/Class[CEPS] marine metagenome genome assembly TARA_038_MES_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 388
End posion on genome 462
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position
cgcaaaaaac
tRNA gene sequence
GGGGCCGTAGGGTAGCCTGGTTGATCCTCGTGGCTTCGGGAGTCACGGACCTGAGTTCAA
ATCTCAGCGGCCCCAttt
Downstream region at tRNA end position
gtcagcgtcg
Secondary structure (Cloverleaf model)
>WENV170204194	Pro	CGG
                   c      Attt gtcagcgtcg
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     G - C          T A
                    T     G A C T C     A
    C C G A        A      | | | | |     A
  T         T G G G       C T G A G     C
  G           | | +                 T T
  G         T C C T
    T T G A        C     GGAC
                    G - C
                    T - A
                    G - C
                    G + T
                    C - G
                  T       A
                  T       G
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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