The detailed information of tRNA gene sequence


Sequence ID>WENV170206787
Genome IDCEPU01011976
Search identical group
Phylum/Class[CEPU] marine metagenome genome assembly TARA_041_SRF_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 115
End posion on genome 189
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
gaagaatcag
tRNA gene sequence 
AGGAGCATAGTGACAATGGTAACACATCTGATTCCAAACCAGAAAATGAGGGTTCAAGTC
CTTCTGCTCCTGCCA
Downstream region at tRNA end position 
aatcaacaga
Secondary structure (Cloverleaf model)
>WENV170206787	Trp	CCA
                   g      GCCA aatcaacaga
                     A - T
                     G - C
                     G - C
                     A - T
                     G - C
                     C - G
                     A - T          T G
                    T     C T T C C     A
      A A C        A      | | + | |     A
    T       A G T G       G A G G G     C
    G         | | |                 T T
    G       A C A C
      T A          A     AAAT
                    T - A
                    C - G
                    T - A
                    G - C
                    A   C
                  T       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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