The detailed information of tRNA gene sequence


Sequence ID>WENV170207379
Genome IDCEPU01075733
Search identical group
Phylum/Class[CEPU] marine metagenome genome assembly TARA_041_SRF_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 345
End posion on genome 259
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
tctcccccgc
tRNA gene sequence 
GGAGGATTCGCCTAGTGGCCTATGGCGCTCGCTTGGAAAGCGGGTTGGGTTAATAGCCCT
CAGGGGTTCGAATCCCCTATCCTCCGCgc
Downstream region at tRNA end position 
gattcgcctg
Secondary structure (Cloverleaf model)
>WENV170207379	Ser	GGA
                   c      GCgc gattcgcctg
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     A - T
                     T - A          T A
                    T     T C C C C     A
      T G A        C      | | | | |     G
    G       T C C G       A G G G G     C
    G         | | |                 T T
    C       T G G C
      C T A        G     TTGGGTTAATAGCCCTC
                    C - G
                    T + G
                    C - G
                    G - C
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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