The detailed information of tRNA gene sequence


Sequence ID>WENV170208119
Genome IDCEPU01154269
Search identical group
Phylum/Class[CEPU] marine metagenome genome assembly TARA_041_SRF_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 204
End posion on genome 275
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ttatgtttga
tRNA gene sequence 
AGCAAAATAGAGTAAAGGTTAACTCGTCGGGCTCATAATCCGAAGATAAGGGTTCGAATC
CTTTTTTTGTTAaat
Downstream region at tRNA end position 
cataatgttt
Secondary structure (Cloverleaf model)
>WENV170208119	Met	CAT
                   a      Aaat cataatgttt
                     A - T
                     G + T
                     C - G
                     A - T
                     A - T
                     A - T
                     A - T          T A
                    T     T T T C C     A
      A A A        A      | | + | |     G
    G       T G A G       A A G G G     C
    G       | | | |                 T T
    T       A C T C
      T A          G     AGAT
                    T - A
                    C - G
                    G - C
                    G - C
                    G + T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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